PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109877.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 381aa    MW: 42498.8 Da    PI: 5.4059
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109877.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.61e-1553142185
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                     +W+++ + +Li+a  ++  +l+rg+l++++W++v++++     + ++ +r+ +qCk++++ ++k+yk +k++ ++ +   +s++ +fd+ 
  XP_010109877.1  53 CWSEEATATLIDAWGRRYVELNRGNLRQKDWQDVADAVnalhgHTKKTHRTDVQCKNRIDTIKKKYKVEKARVSSSNGAFTSSWTFFDRF 142
                     7****************************************99999*****************************99999*******986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.6E-2551143No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MGDITDSLTP PPPAPTTTTT TTTPSSSAAA APTPLFQNQN SSSSRPMPVR EDCWSEEATA  60
TLIDAWGRRY VELNRGNLRQ KDWQDVADAV NALHGHTKKT HRTDVQCKNR IDTIKKKYKV  120
EKARVSSSNG AFTSSWTFFD RFDVLIGSNQ KKPSPPSLSP SPPVAVPLLP YRKASSTALV  180
AIPQKRSAPP PVAADEGFFR RNYSAMAAAA AAAEAEEDED DLENEEEVDE EEEEERESED  240
EGGVAVGDAE GMRRLARAIA RFGAVYEKVE GEKLRQMVEL EKQRMQFAKD LEVQRMRMFM  300
DTQVQLERIK RGKRSASNVQ TVMIYMIEFA HSDVCPARSM LERSGLLELT VMFWYVRVGI  360
VEEGDVHNCK RSSYSSVAAL R
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109877.10.0hypothetical protein L484_003807
TrEMBLW9SBP60.0W9SBP6_9R
STRINGGLYMA13G30280.11e-113(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11100.12e-51sequence-specific DNA binding transcription factors